Index

A

add_datetime_columns() (in module bhf_smarthealth.utils.df_utils) add_gps_as_geometry() (in module bhf_smarthealth.parse.gps_parser)

aggregate_intraday_data() (in module bhf_smarthealth.parse.intraday_parser) apply_agg_over_interval() (in module bhf_smarthealth.utils.df_utils) apply_func_list_to_df() (in module bhf_smarthealth.utils.df_utils)

B

bhf_smarthealth module bhf_smarthealth.config module bhf_smarthealth.enrich module bhf_smarthealth.enrich.lsoa_ahah_enrich module bhf_smarthealth.log module bhf_smarthealth.log.log_config module bhf_smarthealth.parse module bhf_smarthealth.parse.data_validation module bhf_smarthealth.parse.gps_parser module bhf_smarthealth.parse.intraday_parser module bhf_smarthealth.parse.summary_parser module

bhf_smarthealth.process module bhf_smarthealth.process.gps_process module bhf_smarthealth.process.intraday_process module bhf_smarthealth.process.summary_process module bhf_smarthealth.utils module bhf_smarthealth.utils.aggregators module bhf_smarthealth.utils.data_io module bhf_smarthealth.utils.df_utils module bhf_smarthealth.utils.sync_db module bhf_smarthealth.utils.workflow_utils module breathingRate (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

C

calculate_distances() (in module bhf_smarthealth.parse.gps_parser) calculate_speeds() (in module bhf_smarthealth.parse.gps_parser) calories (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

caloriesBMR (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) connect_and_load_target() (in module bhf_smarthealth.utils.sync_db) create_dataframe() (in module bhf_smarthealth.parse.intraday_parser) (in module bhf_smarthealth.parse.summary_parser)

D

d (bhf_smarthealth.parse.data_validation.GPSDataPoint attribute) (bhf_smarthealth.parse.intraday_parser.intraday_datapoint attribute) dailyRmssd (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) deepRmssd (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) DEFAULT_AHAH_AGG_DICT (in module bhf_smarthealth.config) DEFAULT_AHAH_FIELDS (in module bhf_smarthealth.config) DEFAULT_AHAH_MERGE_COL (in module bhf_smarthealth.config) DEFAULT_AHAH_TIME_PERIOD (in module bhf_smarthealth.config) DEFAULT_DECIMAL_PLACES (in module bhf_smarthealth.config) DEFAULT_FB_INTRADAY_AGG_DICT (in module bhf_smarthealth.config) DEFAULT_FB_INTRADAY_AGG_SETTINGS (in module bhf_smarthealth.config) DEFAULT_GPS_AGG_DICT (in module bhf_smarthealth.config) DEFAULT_GPS_CRS (in module bhf_smarthealth.config)

DEFAULT_GPS_FILE_NAME (in module bhf_smarthealth.config) DEFAULT_GPS_OUTPUT_COLUMNS (in module bhf_smarthealth.config) default_log_format() (in module bhf_smarthealth.log.log_config) DEFAULT_LOG_LEVEL (in module bhf_smarthealth.config) DEFAULT_MAX_SPEED_MS (in module bhf_smarthealth.config) DEFAULT_MAX_TIME_JUMP_MINS (in module bhf_smarthealth.config) DEFAULT_PLANAR_CRS (in module bhf_smarthealth.config) DEFAULT_REMOVE_AHAH_COLUMNS (in module bhf_smarthealth.config) DEFAULT_REMOVE_GPS_COLUMNS (in module bhf_smarthealth.config) DEFAULT_RENAME_AHAH_COLUMNS (in module bhf_smarthealth.config) DEFAULT_RENAME_GPS_COLUMNS (in module bhf_smarthealth.config) DEFAULT_TIME_PERIOD (in module bhf_smarthealth.config) distance (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

E

elevation (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

enrich_LSOA_out() (in module bhf_smarthealth.enrich.lsoa_ahah_enrich)

F

filter_invalid_gps_points() (bhf_smarthealth.parse.data_validation.GPSDataList method) filter_speeds() (in module bhf_smarthealth.parse.gps_parser)

filter_time_jumps() (in module bhf_smarthealth.parse.gps_parser) FitbitSummaryData (class in bhf_smarthealth.parse.data_validation) floors (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

G

generate_dates() (in module bhf_smarthealth.utils.workflow_utils) get_intraday_summary_stats() (in module bhf_smarthealth.parse.intraday_parser) get_upsert_counts() (in module bhf_smarthealth.utils.sync_db)

get_valid_targets() (in module bhf_smarthealth.utils.workflow_utils) gps_to_dataframe() (in module bhf_smarthealth.parse.gps_parser) GPSDataList (class in bhf_smarthealth.parse.data_validation) GPSDataPoint (class in bhf_smarthealth.parse.data_validation)

I

intraday_datapoint (class in bhf_smarthealth.parse.intraday_parser)

IntradayDataList (class in bhf_smarthealth.parse.data_validation) IntradayDataPoint (class in bhf_smarthealth.parse.data_validation)

J

join_dataframes() (in module bhf_smarthealth.utils.df_utils)

join_spatial_data() (in module bhf_smarthealth.parse.gps_parser)

L

lat (bhf_smarthealth.parse.data_validation.GPSDataPoint attribute) load_data_from_file() (in module bhf_smarthealth.utils.data_io) load_gps_json() (in module bhf_smarthealth.parse.gps_parser) load_json() (in module bhf_smarthealth.parse.intraday_parser) (in module bhf_smarthealth.parse.summary_parser) logger (in module bhf_smarthealth.enrich.lsoa_ahah_enrich) (in module bhf_smarthealth.parse.data_validation) (in module bhf_smarthealth.parse.gps_parser) (in module bhf_smarthealth.parse.intraday_parser) (in module bhf_smarthealth.parse.summary_parser) (in module bhf_smarthealth.process.gps_process) (in module bhf_smarthealth.process.intraday_process) (in module bhf_smarthealth.process.summary_process) (in module bhf_smarthealth.utils.aggregators) (in module bhf_smarthealth.utils.data_io) (in module bhf_smarthealth.utils.df_utils) (in module bhf_smarthealth.utils.sync_db) (in module bhf_smarthealth.utils.workflow_utils)

long (bhf_smarthealth.parse.data_validation.GPSDataPoint attribute)

M

merge_dataframes() (in module bhf_smarthealth.utils.df_utils) minutesFairlyActive (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) minutesLightlyActive (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) minutesSedentary (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) minutesVeryActive (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) mode_with_later_tiebreak() (in module bhf_smarthealth.utils.aggregators) model_config (bhf_smarthealth.parse.data_validation.GPSDataPoint attribute) (bhf_smarthealth.parse.data_validation.IntradayDataPoint attribute) module bhf_smarthealth bhf_smarthealth.config bhf_smarthealth.enrich bhf_smarthealth.enrich.lsoa_ahah_enrich bhf_smarthealth.log bhf_smarthealth.log.log_config bhf_smarthealth.parse bhf_smarthealth.parse.data_validation bhf_smarthealth.parse.gps_parser bhf_smarthealth.parse.intraday_parser bhf_smarthealth.parse.summary_parser bhf_smarthealth.process bhf_smarthealth.process.gps_process bhf_smarthealth.process.intraday_process bhf_smarthealth.process.summary_process bhf_smarthealth.utils bhf_smarthealth.utils.aggregators bhf_smarthealth.utils.data_io bhf_smarthealth.utils.df_utils bhf_smarthealth.utils.sync_db bhf_smarthealth.utils.workflow_utils

N

nullify_lsoa_at_invalid_timepoints() (in module bhf_smarthealth.parse.gps_parser)

P

process_day() (in module bhf_smarthealth.process.gps_process) (in module bhf_smarthealth.process.intraday_process) (in module bhf_smarthealth.process.summary_process)

process_file() (in module bhf_smarthealth.process.intraday_process) (in module bhf_smarthealth.process.summary_process) process_gps_file() (in module bhf_smarthealth.process.gps_process)

R

remove_columns() (in module bhf_smarthealth.utils.df_utils) rename_columns() (in module bhf_smarthealth.utils.df_utils)

root (bhf_smarthealth.parse.data_validation.GPSDataList attribute) (bhf_smarthealth.parse.data_validation.IntradayDataList attribute) run_upsert_update() (in module bhf_smarthealth.utils.sync_db)

S

save_dataframe_ouput() (in module bhf_smarthealth.utils.data_io) setup_global_logger() (in module bhf_smarthealth.log.log_config) setup_rule_log() (in module bhf_smarthealth.log.log_config) sleep_deep_minutes (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) sleep_light_minutes (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) sleep_minutesToFallAsleep (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

sleep_rem_minutes (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) sleep_timeInBed (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) sleep_wake_minutes (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) SP02_avg (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) SP02_max (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) SP02_min (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) steps (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

T

tempCore (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)

timestamp (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute) (bhf_smarthealth.parse.data_validation.IntradayDataPoint attribute)

V

v (bhf_smarthealth.parse.intraday_parser.intraday_datapoint attribute) validate_data() (in module bhf_smarthealth.parse.intraday_parser) (in module bhf_smarthealth.parse.summary_parser) validate_dataframe_columns() (in module bhf_smarthealth.utils.df_utils)

validate_datetime_index() (in module bhf_smarthealth.utils.df_utils) validate_gps_data() (in module bhf_smarthealth.parse.gps_parser) value (bhf_smarthealth.parse.data_validation.IntradayDataPoint attribute) vo2Max (bhf_smarthealth.parse.data_validation.FitbitSummaryData attribute)